Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Immune Effector Process (GO:0002252) Genes Targeted by hsa-mir-640 in CA Breast Sorlie Cluster 17 Table contains all genes in the CA Breast Sorlie cluster number 17. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-640 GO:0002252 151636 DTX3L deltex 3-like (Drosophila) [Source:HGNC Symbol;Acc:30323] T 5920 RARRES3 retinoic acid receptor responder (tazarotene induced) 3 [Source:HGNC Symbol;Acc:9869] T 7305 TYROBP TYRO protein tyrosine kinase binding protein [Source:HGNC Symbol;Acc:12449] zzz999 57510 XPO5 exportin 5 [Source:HGNC Symbol;Acc:17675] zzz999 9391 CIAO1 cytosolic iron-sulfur protein assembly 1 [Source:HGNC Symbol;Acc:14280] T 8519 IFITM1 interferon induced transmembrane protein 1 (9-27) [Source:HGNC Symbol;Acc:5412] zzz999 3429 IFI27 interferon, alpha-inducible protein 27 [Source:HGNC Symbol;Acc:5397] zzz999 6117 RPA1 replication protein A1, 70kDa [Source:HGNC Symbol;Acc:10289] zzz999 3620 IDO1 indoleamine 2,3-dioxygenase 1 [Source:HGNC Symbol;Acc:6059] zzz999 5316 PKNOX1 PBX/knotted 1 homeobox 1 [Source:HGNC Symbol;Acc:9022] zzz999 9764 KIAA0513 KIAA0513 [Source:HGNC Symbol;Acc:29058] T 10346 TRIM22 tripartite motif containing 22 [Source:HGNC Symbol;Acc:16379] zzz999 54623 PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25459] zzz999 10207 INADL InaD-like (Drosophila) [Source:HGNC Symbol;Acc:28881] zzz999 4599 MX1 myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) [Source:HGNC Symbol;Acc:7532] zzz999 5610 EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 [Source:HGNC Symbol;Acc:9437] zzz999 23788 MTCH2 mitochondrial carrier homolog 2 (C. elegans) [Source:HGNC Symbol;Acc:17587] zzz999 2537 IFI6 interferon, alpha-inducible protein 6 [Source:HGNC Symbol;Acc:4054] zzz999 567 B2M beta-2-microglobulin [Source:HGNC Symbol;Acc:914] zzz999 Yes 7741 zzz999 zzz999 T 3669 ISG20 interferon stimulated exonuclease gene 20kDa [Source:HGNC Symbol;Acc:6130] zzz999 5359 PLSCR1 phospholipid scramblase 1 [Source:HGNC Symbol;Acc:9092] zzz999 129607 CMPK2 cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:HGNC Symbol;Acc:27015] zzz999 9246 UBE2L6 ubiquitin-conjugating enzyme E2L 6 [Source:HGNC Symbol;Acc:12490] zzz999 5662 PSD pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:9507] zzz999 91543 RSAD2 radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:30908] T Yes 4600 MX2 myxovirus (influenza virus) resistance 2 (mouse) [Source:HGNC Symbol;Acc:7533] zzz999 10964 IFI44L interferon-induced protein 44-like [Source:HGNC Symbol;Acc:17817] zzz999 6908 TBP TATA box binding protein [Source:HGNC Symbol;Acc:11588] zzz999 79154 DHRS11 dehydrogenase/reductase (SDR family) member 11 [Source:HGNC Symbol;Acc:28639] T 9636 ISG15 ISG15 ubiquitin-like modifier [Source:HGNC Symbol;Acc:4053] T 3106 HLA-B major histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:4932] T 64400 AKTIP AKT interacting protein [Source:HGNC Symbol;Acc:16710] zzz999 100507436 MICA MHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:7090] zzz999 Yes 713 C1QB complement component 1, q subcomponent, B chain [Source:HGNC Symbol;Acc:1242] zzz999 Yes 6507 SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 [Source:HGNC Symbol;Acc:10941] zzz999 6672 SP100 SP100 nuclear antigen [Source:HGNC Symbol;Acc:11206] T 23586 DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Source:HGNC Symbol;Acc:19102] T Yes 5800 PTPRO protein tyrosine phosphatase, receptor type, O [Source:HGNC Symbol;Acc:9678] zzz999 7319 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:HGNC Symbol;Acc:12472] zzz999 4151 MB myoglobin [Source:HGNC Symbol;Acc:6915] zzz999 3959 LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein [Source:HGNC Symbol;Acc:6564] zzz999 6772 STAT1 signal transducer and activator of transcription 1, 91kDa [Source:HGNC Symbol;Acc:11362] zzz999 103 ADAR adenosine deaminase, RNA-specific [Source:HGNC Symbol;Acc:225] T 1062 CENPE centromere protein E, 312kDa [Source:HGNC Symbol;Acc:1856] zzz999 6890 TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:HGNC Symbol;Acc:43] zzz999 Yes 2972 BRF1 BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) [Source:HGNC Symbol;Acc:11551] T 4481 MSR1 macrophage scavenger receptor 1 [Source:HGNC Symbol;Acc:7376] T 10379 IRF9 interferon regulatory factor 9 [Source:HGNC Symbol;Acc:6131] zzz999 7003 TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) [Source:HGNC Symbol;Acc:11714] zzz999 6737 TRIM21 tripartite motif containing 21 [Source:HGNC Symbol;Acc:11312] zzz999 7251 TSG101 tumor susceptibility gene 101 [Source:HGNC Symbol;Acc:15971] zzz999 3434 IFIT1 interferon-induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:5407] zzz999 3433 IFIT2 interferon-induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:5409] zzz999 684 BST2 bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:1119] zzz999 Yes 5699 PSMB10 proteasome (prosome, macropain) subunit, beta type, 10 [Source:HGNC Symbol;Acc:9538] zzz999 3430 IFI35 interferon-induced protein 35 [Source:HGNC Symbol;Acc:5399] zzz999 3105 HLA-A major histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:4931] zzz999 Yes 3431 SP110 SP110 nuclear body protein [Source:HGNC Symbol;Acc:5401] zzz999 4976 OPA1 optic atrophy 1 (autosomal dominant) [Source:HGNC Symbol;Acc:8140] T

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.